Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 AC105339.3-201ENST00000560043 636 ntBASIC15.3■□□□□ 0.04
LRRC58Q96CX6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 AC005593.1-201ENST00000624894 515 ntBASIC15.3■□□□□ 0.04
LRRC58Q96CX6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC58Q96CX6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AL589702.1-201ENST00000641229 1509 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AL513480.1-201ENST00000451731 511 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 KRT18P34-201ENST00000488218 1270 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AC073648.2-201ENST00000510116 352 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AL121894.2-201ENST00000602977 491 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AC009090.5-201ENST00000624886 2285 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 CICP23-201ENST00000605013 2741 ntBASIC15.29■□□□□ 0.04
LRRC58Q96CX6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC58Q96CX6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.28■□□□□ 0.04
LRRC58Q96CX6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms