Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 AL035456.1-201ENST00000456064 1369 ntBASIC16.81■□□□□ 0.28
RNF34Q969K3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF34Q969K3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RNF34Q969K3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.81■□□□□ 0.28
RNF34Q969K3 AC245100.5-201ENST00000452108 331 ntBASIC16.81■□□□□ 0.28
RNF34Q969K3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF34Q969K3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF34Q969K3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNF34Q969K3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF34Q969K3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF34Q969K3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF34Q969K3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF34Q969K3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF34Q969K3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF34Q969K3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 MIR648-201ENST00000385046 94 ntBASIC16.8■□□□□ 0.28
RNF34Q969K3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF34Q969K3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 AC107890.1-201ENST00000422478 521 ntBASIC16.8■□□□□ 0.28
RNF34Q969K3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF34Q969K3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF34Q969K3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 RN7SL828P-201ENST00000607615 303 ntBASIC16.8■□□□□ 0.28
RNF34Q969K3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF34Q969K3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RNF34Q969K3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF34Q969K3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF34Q969K3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF34Q969K3 DOC2GP-204ENST00000639052 2548 ntBASIC16.79■□□□□ 0.28
RNF34Q969K3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF34Q969K3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF34Q969K3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RNF34Q969K3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF34Q969K3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms