Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AC006538.3-201ENST00000612495 578 ntBASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AL592424.1-201ENST00000563624 1536 ntBASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AP002414.2-201ENST00000591780 3365 ntBASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 PCDHA3-202ENST00000532566 4594 ntBASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 HCG4B-203ENST00000450128 991 ntBASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 AC002347.1-201ENST00000569543 541 ntBASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB40AQ8WXH6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 AL009178.2-201ENST00000597278 2719 ntBASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms