Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.18■□□□□ 0.82
PROM2Q8N271 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC20.17■□□□□ 0.82
PROM2Q8N271 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PROM2Q8N271 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PROM2Q8N271 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC20.17■□□□□ 0.82
PROM2Q8N271 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.17■□□□□ 0.82
PROM2Q8N271 IQSEC3P1-201ENST00000538799 536 ntBASIC20.17■□□□□ 0.82
PROM2Q8N271 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.17■□□□□ 0.82
PROM2Q8N271 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.17■□□□□ 0.82
PROM2Q8N271 AC105148.1-201ENST00000604961 409 ntBASIC20.17■□□□□ 0.82
PROM2Q8N271 AC026740.1-201ENST00000607068 791 ntBASIC20.17■□□□□ 0.82
PROM2Q8N271 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 AP000346.4-201ENST00000614827 381 ntBASIC20.17■□□□□ 0.82
PROM2Q8N271 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
PROM2Q8N271 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PROM2Q8N271 AC134043.2-201ENST00000624206 2238 ntBASIC20.17■□□□□ 0.82
PROM2Q8N271 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.16■□□□□ 0.82
PROM2Q8N271 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PROM2Q8N271 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.16■□□□□ 0.82
PROM2Q8N271 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.16■□□□□ 0.82
PROM2Q8N271 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.16■□□□□ 0.82
PROM2Q8N271 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC20.16■□□□□ 0.82
PROM2Q8N271 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC20.16■□□□□ 0.82
PROM2Q8N271 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 GAPDHP40-201ENST00000505218 1006 ntBASIC20.16■□□□□ 0.82
PROM2Q8N271 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.16■□□□□ 0.82
PROM2Q8N271 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC20.16■□□□□ 0.82
PROM2Q8N271 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.16■□□□□ 0.82
PROM2Q8N271 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 AF254983.2-201ENST00000612331 135 ntBASIC20.16■□□□□ 0.82
PROM2Q8N271 AC138649.2-201ENST00000615886 705 ntBASIC20.16■□□□□ 0.82
PROM2Q8N271 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.16■□□□□ 0.82
PROM2Q8N271 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.16■□□□□ 0.82
PROM2Q8N271 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.16■□□□□ 0.82
PROM2Q8N271 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PROM2Q8N271 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PROM2Q8N271 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.16■□□□□ 0.82
PROM2Q8N271 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 AC068880.1-201ENST00000507289 2297 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
PROM2Q8N271 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 AC018470.1-201ENST00000624790 3129 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.15■□□□□ 0.82
PROM2Q8N271 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.15■□□□□ 0.82
PROM2Q8N271 PHKG1P2-201ENST00000457537 863 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC20.15■□□□□ 0.82
PROM2Q8N271 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.15■□□□□ 0.82
PROM2Q8N271 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.15■□□□□ 0.82
PROM2Q8N271 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC20.15■□□□□ 0.82
PROM2Q8N271 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.15■□□□□ 0.82
PROM2Q8N271 AC009118.3-201ENST00000622896 873 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.15■□□□□ 0.82
PROM2Q8N271 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.15■□□□□ 0.82
PROM2Q8N271 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.15■□□□□ 0.82
PROM2Q8N271 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PROM2Q8N271 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
PROM2Q8N271 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PROM2Q8N271 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms