Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.64■□□□□ 0.25
CCDC25Q86WR0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 REXO1L6P-202ENST00000619970 1078 ntBASIC16.64■□□□□ 0.25
CCDC25Q86WR0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC25Q86WR0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC073621.1-201ENST00000392730 636 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 KRT18P27-201ENST00000427733 1299 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 RPS2P1-201ENST00000434010 821 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC091304.2-201ENST00000564639 760 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC008667.4-201ENST00000607370 168 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC021097.1-201ENST00000607902 574 ntBASIC16.63■□□□□ 0.25
CCDC25Q86WR0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC25Q86WR0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC25Q86WR0 RNU1-129P-201ENST00000384064 167 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms