Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AP001258.2-201ENST00000529891 490 ntBASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AL354989.2-201ENST00000435838 1540 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AC011676.5-201ENST00000624864 2660 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AC106886.4-201ENST00000623557 2502 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 ACKR1-201ENST00000368121 1240 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AC020914.3-201ENST00000594712 304 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 NDUFV2P1-201ENST00000596415 907 ntBASIC16.17■□□□□ 0.18
DENND4AQ7Z401 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4AQ7Z401 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 HINT2P1-201ENST00000419438 481 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 AKR7A2P1-201ENST00000460134 915 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 UPF3AP2-201ENST00000457924 1132 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 AC016629.1-201ENST00000596579 586 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms