Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 KRT18P3-201ENST00000451602 1288 ntBASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PRYP6-201ENST00000514804 343 ntBASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PDPK2P-202ENST00000562415 1191 ntBASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST3H2AQ7L7L0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST3H2AQ7L7L0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AC073439.1-201ENST00000624121 1774 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AC106730.1-201ENST00000566722 1090 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 AL121894.2-201ENST00000602977 491 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 FAM197Y3-203ENST00000618346 717 ntBASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST3H2AQ7L7L0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 SBF1P1-201ENST00000444527 5631 ntBASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST3H2AQ7L7L0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms