Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 UNC93B2-201ENST00000285383 730 ntBASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 C1QBPP2-201ENST00000528754 825 ntBASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 AL160237.2-201ENST00000556165 472 ntBASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 PMPCAP1-201ENST00000508114 1576 ntBASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC00299Q6ZSB3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 AC148477.5-201ENST00000625164 1645 ntBASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00299Q6ZSB3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 TMEM198B-204ENST00000484016 896 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 AC009533.2-201ENST00000543664 586 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 GCSHP2-201ENST00000560971 527 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 AC005336.2-201ENST00000593183 939 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 LINC01023-201ENST00000606054 436 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 AL365330.1-201ENST00000607459 531 ntBASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00299Q6ZSB3 AL161772.1-201ENST00000610494 4412 ntBASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 AC097359.2-201ENST00000604992 2389 ntBASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms