Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 C8orf49-201ENST00000525043 1968 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AC087499.1-201ENST00000418141 1075 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 KRT18P38-201ENST00000449496 1282 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AC093827.2-201ENST00000512654 315 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AC091167.2-201ENST00000579581 588 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 MIR600HG-201ENST00000449175 5984 ntBASIC15.17■□□□□ 0.02
LPCAT4Q643R3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT4Q643R3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 CICP20-201ENST00000443330 2801 ntBASIC15.16■□□□□ 0.02
LPCAT4Q643R3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 AC145285.6-201ENST00000604632 637 ntBASIC15.16■□□□□ 0.02
LPCAT4Q643R3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 IGHV3-41-201ENST00000613121 348 ntBASIC15.16■□□□□ 0.02
LPCAT4Q643R3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 U82695.1-201ENST00000635752 1889 ntBASIC15.16■□□□□ 0.02
LPCAT4Q643R3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 NCF1C-201ENST00000438382 1427 ntBASIC15.16■□□□□ 0.02
LPCAT4Q643R3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT4Q643R3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 TP73-AS1-210ENST00000637775 1455 ntBASIC15.15■□□□□ 0.02
LPCAT4Q643R3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPCAT4Q643R3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms