Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AC069120.2-201ENST00000524091 540 ntBASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AC010491.1-201ENST00000563101 2797 ntBASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 AL355385.1-201ENST00000606123 409 ntBASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TTC39BQ5VTQ0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms