Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 BX005266.1-201ENST00000473402 457 ntBASIC12.82□□□□□ -0.36
FAM78BQ5VT40 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 PRELID1P1-202ENST00000567272 903 ntBASIC12.82□□□□□ -0.36
FAM78BQ5VT40 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.82□□□□□ -0.36
FAM78BQ5VT40 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AL121772.3-201ENST00000610840 674 ntBASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AP001350.2-201ENST00000625104 1094 ntBASIC12.82□□□□□ -0.36
FAM78BQ5VT40 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM78BQ5VT40 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 PTENP1-202ENST00000532280 3996 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC136621.1-201ENST00000624017 2304 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC087163.2-201ENST00000457299 853 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AL139424.1-201ENST00000607572 797 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AP001269.4-201ENST00000609611 512 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AL732292.2-201ENST00000609649 430 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 REXO1L3P-201ENST00000622202 1288 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC006486.2-201ENST00000624246 2199 ntBASIC12.81□□□□□ -0.36
FAM78BQ5VT40 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FAM78BQ5VT40 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM78BQ5VT40 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
FAM78BQ5VT40 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM78BQ5VT40 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM78BQ5VT40 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms