Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 REXO1L8P-201ENST00000604378 1897 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 AC025580.3-201ENST00000617932 1424 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PMS2P7-201ENST00000506558 1336 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 BCAR1-209ENST00000546196 1340 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 AP000347.1-202ENST00000435868 847 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PGAM5P1-201ENST00000518923 814 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PDPK2P-202ENST00000562415 1191 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 AL671883.3-201ENST00000603274 991 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 SNX33P1-201ENST00000592116 1762 ntBASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATPAF1Q5TC12 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 AL009178.2-201ENST00000597278 2719 ntBASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PMS2P4-201ENST00000412466 1052 ntBASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms