Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AL358472.4-201ENST00000633140 710 ntBASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC091951.1-201ENST00000512854 2465 ntBASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AC007292.2-201ENST00000593524 1812 ntBASIC11□□□□□ -0.65
LINC00242Q5T6M2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 FAM185BP-201ENST00000443595 716 ntBASIC11□□□□□ -0.65
LINC00242Q5T6M2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 KRT18P31-201ENST00000506277 1292 ntBASIC11□□□□□ -0.65
LINC00242Q5T6M2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AL121772.3-201ENST00000610840 674 ntBASIC11□□□□□ -0.65
LINC00242Q5T6M2 ACTL9-202ENST00000612068 1252 ntBASIC11□□□□□ -0.65
LINC00242Q5T6M2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms