Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 REXO1L1P-202ENST00000608646 1974 ntBASIC18.35■□□□□ 0.53
USH1GQ495M9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.35■□□□□ 0.53
USH1GQ495M9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 WASH4P-201ENST00000564273 1246 ntBASIC18.35■□□□□ 0.53
USH1GQ495M9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.35■□□□□ 0.53
USH1GQ495M9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 AC008494.3-201ENST00000606615 944 ntBASIC18.35■□□□□ 0.53
USH1GQ495M9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 AC018892.3-201ENST00000623986 2499 ntBASIC18.35■□□□□ 0.53
USH1GQ495M9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USH1GQ495M9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
USH1GQ495M9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USH1GQ495M9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.35■□□□□ 0.53
USH1GQ495M9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 SLC7A15P-201ENST00000424028 1363 ntBASIC18.34■□□□□ 0.53
USH1GQ495M9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.34■□□□□ 0.53
USH1GQ495M9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.34■□□□□ 0.53
USH1GQ495M9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
USH1GQ495M9 TIMM17BP1-201ENST00000545713 516 ntBASIC18.34■□□□□ 0.53
USH1GQ495M9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.34■□□□□ 0.53
USH1GQ495M9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.34■□□□□ 0.53
USH1GQ495M9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 AC007431.3-201ENST00000623221 587 ntBASIC18.34■□□□□ 0.53
USH1GQ495M9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USH1GQ495M9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USH1GQ495M9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USH1GQ495M9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USH1GQ495M9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms