Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.65■□□□□ 0.26
EFEMP1Q12805 BTBD7P1-201ENST00000447253 1453 ntBASIC16.65■□□□□ 0.26
EFEMP1Q12805 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
EFEMP1Q12805 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFEMP1Q12805 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
EFEMP1Q12805 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
EFEMP1Q12805 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
EFEMP1Q12805 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
EFEMP1Q12805 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.64■□□□□ 0.26
EFEMP1Q12805 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AL035633.1-201ENST00000406139 838 ntBASIC16.64■□□□□ 0.25
EFEMP1Q12805 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 EEF1DP4-201ENST00000446006 880 ntBASIC16.64■□□□□ 0.25
EFEMP1Q12805 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SPDYE18-201ENST00000510091 1050 ntBASIC16.64■□□□□ 0.25
EFEMP1Q12805 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 AC104794.3-201ENST00000566840 1248 ntBASIC16.64■□□□□ 0.25
EFEMP1Q12805 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
EFEMP1Q12805 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFEMP1Q12805 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 SPTLC1P1-201ENST00000447199 261 ntBASIC16.63■□□□□ 0.25
EFEMP1Q12805 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 AC025048.3-201ENST00000590609 569 ntBASIC16.63■□□□□ 0.25
EFEMP1Q12805 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 AC005702.4-201ENST00000618393 416 ntBASIC16.63■□□□□ 0.25
EFEMP1Q12805 AC004461.2-201ENST00000629517 803 ntBASIC16.63■□□□□ 0.25
EFEMP1Q12805 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 REXO1L1P-202ENST00000608646 1974 ntBASIC16.63■□□□□ 0.25
EFEMP1Q12805 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.63■□□□□ 0.25
EFEMP1Q12805 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFEMP1Q12805 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
EFEMP1Q12805 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms