Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN1BQ07699 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SCN1BQ07699 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SCN1BQ07699 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN1BQ07699 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN1BQ07699 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN1BQ07699 MTDHP3-201ENST00000594186 672 ntBASIC14.38□□□□□ -0.11
SCN1BQ07699 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 SIGLEC16-201ENST00000599858 1437 ntBASIC14.38□□□□□ -0.11
SCN1BQ07699 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SCN1BQ07699 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SCN1BQ07699 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN1BQ07699 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN1BQ07699 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN1BQ07699 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN1BQ07699 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN1BQ07699 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN1BQ07699 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN1BQ07699 DUX4L17-201ENST00000557360 1267 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 PRELID1P1-202ENST00000567272 903 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 NKAPP1-205ENST00000585790 367 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 AC064862.7-201ENST00000604520 867 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 AL121772.3-201ENST00000610840 674 ntBASIC14.37□□□□□ -0.11
SCN1BQ07699 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN1BQ07699 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN1BQ07699 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCN1BQ07699 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SCN1BQ07699 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN1BQ07699 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN1BQ07699 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCN1BQ07699 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SCN1BQ07699 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SCN1BQ07699 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 AL671710.1-201ENST00000610245 2349 ntBASIC14.36□□□□□ -0.11
SCN1BQ07699 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN1BQ07699 AL390755.1-201ENST00000623716 2027 ntBASIC14.36□□□□□ -0.11
SCN1BQ07699 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN1BQ07699 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms