Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL359075.1-203ENST00000462729 1002 ntBASIC12.56□□□□□ -0.4
ERVFC1-1P60608 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 GCSHP2-201ENST00000560971 527 ntBASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AC011558.1-201ENST00000623459 338 ntBASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ERVFC1-1P60608 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AC087481.3-201ENST00000602886 1894 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 LINC01144-201ENST00000626198 1710 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AL671277.2-201ENST00000458060 996 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AL121956.5-201ENST00000625261 221 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AL358472.4-201ENST00000633140 710 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 AP000550.4-202ENST00000639755 178 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 PCGF3-213ENST00000620529 1899 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 LINC01101-201ENST00000622953 1884 ntBASIC12.55□□□□□ -0.4
ERVFC1-1P60608 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ERVFC1-1P60608 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ERVFC1-1P60608 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms