Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-5P52952 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-5P52952 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 COX5BP2-201ENST00000392354 334 ntBASIC13.66□□□□□ -0.22
NKX2-5P52952 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-5P52952 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-5P52952 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-5P52952 AC105036.2-201ENST00000569468 176 ntBASIC13.66□□□□□ -0.22
NKX2-5P52952 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-5P52952 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-5P52952 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NKX2-5P52952 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-5P52952 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-5P52952 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.66□□□□□ -0.22
NKX2-5P52952 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-5P52952 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-5P52952 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-5P52952 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-5P52952 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-5P52952 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 AC096633.1-201ENST00000422446 749 ntBASIC13.65□□□□□ -0.22
NKX2-5P52952 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX2-5P52952 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.65□□□□□ -0.22
NKX2-5P52952 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-5P52952 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-5P52952 PGM5P2-202ENST00000637225 1043 ntBASIC13.65□□□□□ -0.22
NKX2-5P52952 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-5P52952 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-5P52952 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
NKX2-5P52952 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
NKX2-5P52952 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 AC126365.1-201ENST00000578585 1514 ntBASIC13.64□□□□□ -0.23
NKX2-5P52952 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
NKX2-5P52952 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms