Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.92■□□□□ 0.3
TUBP50607 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.92■□□□□ 0.3
TUBP50607 SPDYE17-201ENST00000412399 783 ntBASIC16.92■□□□□ 0.3
TUBP50607 TSPY16P-201ENST00000449843 468 ntBASIC16.92■□□□□ 0.3
TUBP50607 AC245100.5-201ENST00000452108 331 ntBASIC16.92■□□□□ 0.3
TUBP50607 AC009477.1-201ENST00000452936 217 ntBASIC16.92■□□□□ 0.3
TUBP50607 AL139010.1-201ENST00000454878 894 ntBASIC16.92■□□□□ 0.3
TUBP50607 UGT1A2P-201ENST00000454886 866 ntBASIC16.92■□□□□ 0.3
TUBP50607 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.92■□□□□ 0.3
TUBP50607 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.92■□□□□ 0.3
TUBP50607 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.92■□□□□ 0.3
TUBP50607 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 AC022144.1-201ENST00000602255 1580 ntBASIC16.92■□□□□ 0.3
TUBP50607 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.92■□□□□ 0.3
TUBP50607 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.92■□□□□ 0.3
TUBP50607 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TUBP50607 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBP50607 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.91■□□□□ 0.3
TUBP50607 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.91■□□□□ 0.3
TUBP50607 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 ZNF890P-202ENST00000530367 1156 ntBASIC16.91■□□□□ 0.3
TUBP50607 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TUBP50607 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TUBP50607 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TUBP50607 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBP50607 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBP50607 AL592424.1-201ENST00000563624 1536 ntBASIC16.91■□□□□ 0.3
TUBP50607 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBP50607 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms