Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASP4P49662 KRT8P37-201ENST00000451609 1420 ntBASIC17.47■□□□□ 0.39
CASP4P49662 KRT18P28-201ENST00000453838 1332 ntBASIC17.47■□□□□ 0.39
CASP4P49662 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CASP4P49662 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.46■□□□□ 0.39
CASP4P49662 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.46■□□□□ 0.39
CASP4P49662 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.46■□□□□ 0.39
CASP4P49662 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CASP4P49662 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.46■□□□□ 0.39
CASP4P49662 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CASP4P49662 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CASP4P49662 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.46■□□□□ 0.39
CASP4P49662 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.46■□□□□ 0.39
CASP4P49662 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CASP4P49662 EEF1DP4-201ENST00000446006 880 ntBASIC17.46■□□□□ 0.39
CASP4P49662 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.46■□□□□ 0.39
CASP4P49662 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.46■□□□□ 0.39
CASP4P49662 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AL512356.2-201ENST00000546955 174 ntBASIC17.46■□□□□ 0.39
CASP4P49662 AC004449.1-201ENST00000564240 433 ntBASIC17.46■□□□□ 0.39
CASP4P49662 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 AC026979.3-201ENST00000607315 403 ntBASIC17.46■□□□□ 0.39
CASP4P49662 RN7SL828P-201ENST00000607615 303 ntBASIC17.46■□□□□ 0.39
CASP4P49662 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.46■□□□□ 0.39
CASP4P49662 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CASP4P49662 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.46■□□□□ 0.39
CASP4P49662 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CASP4P49662 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.46■□□□□ 0.39
CASP4P49662 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASP4P49662 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CASP4P49662 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CASP4P49662 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.46■□□□□ 0.38
CASP4P49662 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CASP4P49662 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CASP4P49662 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 AC092127.1-201ENST00000567093 3455 ntBASIC17.45■□□□□ 0.38
CASP4P49662 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.45■□□□□ 0.38
CASP4P49662 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.45■□□□□ 0.38
CASP4P49662 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.45■□□□□ 0.38
CASP4P49662 MIR4313-201ENST00000580760 101 ntBASIC17.45■□□□□ 0.38
CASP4P49662 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.45■□□□□ 0.38
CASP4P49662 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CASP4P49662 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.45■□□□□ 0.38
CASP4P49662 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASP4P49662 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
CASP4P49662 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.44■□□□□ 0.38
CASP4P49662 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASP4P49662 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASP4P49662 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CASP4P49662 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASP4P49662 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CASP4P49662 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASP4P49662 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASP4P49662 AZGP1P1-201ENST00000411909 902 ntBASIC17.44■□□□□ 0.38
CASP4P49662 MTND6P24-201ENST00000440466 518 ntBASIC17.44■□□□□ 0.38
CASP4P49662 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.44■□□□□ 0.38
CASP4P49662 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.44■□□□□ 0.38
CASP4P49662 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms