Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC34P49427 HAUS4P1-201ENST00000406739 1145 ntBASIC12.74□□□□□ -0.37
CDC34P49427 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 AL671277.2-201ENST00000458060 996 ntBASIC12.74□□□□□ -0.37
CDC34P49427 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC34P49427 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC34P49427 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CDC34P49427 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC34P49427 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC34P49427 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 AC114341.1-201ENST00000618070 349 ntBASIC12.74□□□□□ -0.37
CDC34P49427 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 GRK6P1-201ENST00000400595 1711 ntBASIC12.74□□□□□ -0.37
CDC34P49427 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 AL359258.3-201ENST00000622910 2331 ntBASIC12.73□□□□□ -0.37
CDC34P49427 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.73□□□□□ -0.37
CDC34P49427 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 AC090616.6-203ENST00000579186 1945 ntBASIC12.73□□□□□ -0.37
CDC34P49427 ARMC10P1-201ENST00000313754 855 ntBASIC12.73□□□□□ -0.37
CDC34P49427 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 CHCHD2P8-201ENST00000429873 447 ntBASIC12.73□□□□□ -0.37
CDC34P49427 ABCD1P5-201ENST00000445663 754 ntBASIC12.73□□□□□ -0.37
CDC34P49427 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.73□□□□□ -0.37
CDC34P49427 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.73□□□□□ -0.37
CDC34P49427 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms