Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AL450472.2-201ENST00000603663 1156 ntBASIC19.35■□□□□ 0.69
KCNA3P22001 ECM1P1-201ENST00000604092 1279 ntBASIC19.35■□□□□ 0.69
KCNA3P22001 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.35■□□□□ 0.69
KCNA3P22001 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
KCNA3P22001 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
KCNA3P22001 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.35■□□□□ 0.69
KCNA3P22001 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.35■□□□□ 0.69
KCNA3P22001 HLA-A-202ENST00000376806 1854 ntBASIC19.35■□□□□ 0.69
KCNA3P22001 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
KCNA3P22001 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNA3P22001 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.35■□□□□ 0.69
KCNA3P22001 FZD10-202ENST00000539839 3282 ntBASIC19.35■□□□□ 0.69
KCNA3P22001 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 MAGEA5-201ENST00000446757 942 ntBASIC19.34■□□□□ 0.69
KCNA3P22001 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 RN7SL774P-201ENST00000577467 290 ntBASIC19.34■□□□□ 0.69
KCNA3P22001 RN7SL574P-201ENST00000581512 297 ntBASIC19.34■□□□□ 0.69
KCNA3P22001 AC079336.7-201ENST00000623428 1078 ntBASIC19.34■□□□□ 0.69
KCNA3P22001 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNA3P22001 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.34■□□□□ 0.69
KCNA3P22001 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNA3P22001 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
KCNA3P22001 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
KCNA3P22001 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNA3P22001 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.33■□□□□ 0.69
KCNA3P22001 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNA3P22001 PCDHB18P-201ENST00000524813 2368 ntBASIC19.33■□□□□ 0.69
KCNA3P22001 AC020763.4-201ENST00000623414 4170 ntBASIC19.33■□□□□ 0.69
KCNA3P22001 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KCNA3P22001 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNA3P22001 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
KCNA3P22001 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.33■□□□□ 0.68
KCNA3P22001 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 MIR769-201ENST00000390225 118 ntBASIC19.33■□□□□ 0.68
KCNA3P22001 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KCNA3P22001 AL133466.1-201ENST00000447582 150 ntBASIC19.33■□□□□ 0.68
KCNA3P22001 POU5F1P6-201ENST00000466990 990 ntBASIC19.33■□□□□ 0.68
KCNA3P22001 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.33■□□□□ 0.68
KCNA3P22001 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.33■□□□□ 0.68
KCNA3P22001 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.33■□□□□ 0.68
KCNA3P22001 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNA3P22001 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.33■□□□□ 0.68
KCNA3P22001 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNA3P22001 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 AC134407.2-201ENST00000625089 1978 ntBASIC19.33■□□□□ 0.68
KCNA3P22001 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KCNA3P22001 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNA3P22001 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
KCNA3P22001 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms