Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ATF7P17544 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATF7P17544 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.61■□□□□ 0.41
ATF7P17544 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF7P17544 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF7P17544 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
ATF7P17544 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATF7P17544 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
ATF7P17544 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATF7P17544 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ATF7P17544 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 U91328.1-201ENST00000437528 223 ntBASIC17.6■□□□□ 0.41
ATF7P17544 GPR53P-205ENST00000457298 1084 ntBASIC17.6■□□□□ 0.41
ATF7P17544 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.6■□□□□ 0.41
ATF7P17544 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF7P17544 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF7P17544 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ATF7P17544 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 AL033527.5-202ENST00000641632 1098 ntBASIC17.6■□□□□ 0.41
ATF7P17544 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 AC005622.1-201ENST00000636801 1703 ntBASIC17.6■□□□□ 0.41
ATF7P17544 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF7P17544 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF7P17544 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF7P17544 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF7P17544 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF7P17544 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
ATF7P17544 ALOX12P2-203ENST00000570921 1945 ntBASIC17.59■□□□□ 0.41
ATF7P17544 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ATF7P17544 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 AC114501.2-201ENST00000439631 535 ntBASIC17.59■□□□□ 0.41
ATF7P17544 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.59■□□□□ 0.41
ATF7P17544 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.59■□□□□ 0.41
ATF7P17544 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.59■□□□□ 0.41
ATF7P17544 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 AC026979.3-201ENST00000607315 403 ntBASIC17.59■□□□□ 0.41
ATF7P17544 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF7P17544 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATF7P17544 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATF7P17544 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATF7P17544 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
ATF7P17544 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ATF7P17544 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF7P17544 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF7P17544 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF7P17544 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF7P17544 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF7P17544 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF7P17544 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ATF7P17544 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms