Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 DRAXINP1-201ENST00000437611 948 ntBASIC12.04□□□□□ -0.48
SMIM17P0DL12 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 DUX4L26-201ENST00000489078 1255 ntBASIC12.04□□□□□ -0.48
SMIM17P0DL12 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 BNIP3P18-201ENST00000593976 575 ntBASIC12.04□□□□□ -0.48
SMIM17P0DL12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AL031731.1-201ENST00000642131 2094 ntBASIC12.04□□□□□ -0.48
SMIM17P0DL12 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 RCN1P1-201ENST00000400413 996 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 MPDU1-223ENST00000582151 728 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 AL353135.1-201ENST00000606729 504 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC026748.1-201ENST00000624349 3251 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms