Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 UPF3AP3-201ENST00000420996 769 ntBASIC16.12■□□□□ 0.17
APOA4P06727 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 GPX1P2-201ENST00000429271 606 ntBASIC16.12■□□□□ 0.17
APOA4P06727 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 TIMM8BP1-201ENST00000452384 211 ntBASIC16.12■□□□□ 0.17
APOA4P06727 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.12■□□□□ 0.17
APOA4P06727 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.12■□□□□ 0.17
APOA4P06727 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
APOA4P06727 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
APOA4P06727 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
APOA4P06727 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOA4P06727 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.11■□□□□ 0.17
APOA4P06727 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 AC105233.2-201ENST00000523697 349 ntBASIC16.11■□□□□ 0.17
APOA4P06727 AF228730.5-201ENST00000530288 346 ntBASIC16.11■□□□□ 0.17
APOA4P06727 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
APOA4P06727 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.11■□□□□ 0.17
APOA4P06727 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 AL365330.1-201ENST00000607459 531 ntBASIC16.11■□□□□ 0.17
APOA4P06727 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 AC008267.7-201ENST00000624570 1194 ntBASIC16.11■□□□□ 0.17
APOA4P06727 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
APOA4P06727 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
APOA4P06727 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.11■□□□□ 0.17
APOA4P06727 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.11■□□□□ 0.17
APOA4P06727 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOA4P06727 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms