Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU1-114P-201ENST00000365297 166 ntBASIC9.76□□□□□ -0.85
APOBP04114 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
APOBP04114 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 LINC01144-201ENST00000626198 1710 ntBASIC9.76□□□□□ -0.85
APOBP04114 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 RGS5-214ENST00000429865 754 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 AC135983.4-201ENST00000564116 1262 ntBASIC9.75□□□□□ -0.85
APOBP04114 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 CASP16P-204ENST00000635032 809 ntBASIC9.75□□□□□ -0.85
APOBP04114 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 AL161670.2-201ENST00000557650 1227 ntBASIC9.75□□□□□ -0.85
APOBP04114 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 AC004923.1-202ENST00000642106 209 ntBASIC9.75□□□□□ -0.85
APOBP04114 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 AC007718.1-201ENST00000621078 280 ntBASIC9.75□□□□□ -0.85
APOBP04114 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC9.75□□□□□ -0.85
APOBP04114 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 AL133373.2-201ENST00000623187 2828 ntBASIC9.75□□□□□ -0.85
APOBP04114 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
APOBP04114 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 RN7SL818P-201ENST00000485099 259 ntBASIC9.75□□□□□ -0.85
APOBP04114 MIR4683-201ENST00000579659 81 ntBASIC9.75□□□□□ -0.85
APOBP04114 RPL17P45-201ENST00000586289 509 ntBASIC9.75□□□□□ -0.85
APOBP04114 RN7SL725P-201ENST00000606439 259 ntBASIC9.75□□□□□ -0.85
APOBP04114 ENPP7P14-201ENST00000621765 1040 ntBASIC9.75□□□□□ -0.85
APOBP04114 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC9.75□□□□□ -0.85
APOBP04114 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
APOBP04114 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
APOBP04114 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
APOBP04114 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SYT17-208ENST00000568433 812 ntTSL 3 BASIC9.74□□□□□ -0.85
APOBP04114 AC138894.2-201ENST00000602838 371 ntBASIC9.74□□□□□ -0.85
APOBP04114 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms