Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC113404.2-201ENST00000507884 177 ntBASIC12.89□□□□□ -0.35
APOC3P02656 AC112698.1-201ENST00000510299 916 ntBASIC12.89□□□□□ -0.35
APOC3P02656 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.89□□□□□ -0.35
APOC3P02656 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 AC008687.6-201ENST00000596318 630 ntBASIC12.89□□□□□ -0.35
APOC3P02656 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
APOC3P02656 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 AL031731.1-201ENST00000642131 2094 ntBASIC12.89□□□□□ -0.35
APOC3P02656 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC3P02656 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
APOC3P02656 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC3P02656 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APOC3P02656 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC3P02656 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 MIR4674-201ENST00000582457 87 ntBASIC12.88□□□□□ -0.35
APOC3P02656 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.88□□□□□ -0.35
APOC3P02656 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.88□□□□□ -0.35
APOC3P02656 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC3P02656 AC013467.2-201ENST00000605472 835 ntBASIC12.88□□□□□ -0.35
APOC3P02656 AC231657.2-201ENST00000624556 255 ntBASIC12.88□□□□□ -0.35
APOC3P02656 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APOC3P02656 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 AC015909.5-201ENST00000624336 2266 ntBASIC12.88□□□□□ -0.35
APOC3P02656 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APOC3P02656 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
APOC3P02656 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 CES1P1-201ENST00000421606 1704 ntBASIC12.88□□□□□ -0.35
APOC3P02656 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
APOC3P02656 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC3P02656 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC3P02656 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
APOC3P02656 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC3P02656 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC3P02656 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOC3P02656 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
APOC3P02656 AL591122.2-201ENST00000624125 1853 ntBASIC12.87□□□□□ -0.35
APOC3P02656 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC3P02656 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC3P02656 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC3P02656 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms