Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.13□□□□□ -0.47
LTAP01374 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.13□□□□□ -0.47
LTAP01374 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LTAP01374 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LTAP01374 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LTAP01374 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LTAP01374 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.13□□□□□ -0.47
LTAP01374 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LTAP01374 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.13□□□□□ -0.47
LTAP01374 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 WASH6P-202ENST00000359512 1437 ntBASIC12.12□□□□□ -0.47
LTAP01374 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
LTAP01374 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.12□□□□□ -0.47
LTAP01374 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.12□□□□□ -0.47
LTAP01374 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.12□□□□□ -0.47
LTAP01374 AC006557.2-201ENST00000592985 1240 ntBASIC12.12□□□□□ -0.47
LTAP01374 MTDHP3-201ENST00000594186 672 ntBASIC12.12□□□□□ -0.47
LTAP01374 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LTAP01374 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
LTAP01374 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
LTAP01374 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LTAP01374 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
LTAP01374 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 FGD5P1-202ENST00000614866 2498 ntBASIC12.11□□□□□ -0.47
LTAP01374 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LTAP01374 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LTAP01374 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
LTAP01374 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.11□□□□□ -0.47
LTAP01374 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.11□□□□□ -0.47
LTAP01374 RPS15P9-201ENST00000494093 319 ntBASIC12.11□□□□□ -0.47
LTAP01374 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.11□□□□□ -0.47
LTAP01374 AP002469.2-201ENST00000531724 424 ntBASIC12.11□□□□□ -0.47
LTAP01374 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.11□□□□□ -0.47
LTAP01374 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
LTAP01374 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.11□□□□□ -0.47
LTAP01374 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.11□□□□□ -0.47
LTAP01374 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 PCDHA3-202ENST00000532566 4594 ntBASIC12.11□□□□□ -0.47
LTAP01374 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LTAP01374 AC007326.2-201ENST00000624224 7579 ntBASIC12.11□□□□□ -0.47
LTAP01374 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LTAP01374 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LTAP01374 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
LTAP01374 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LTAP01374 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms