Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-CO1P00395 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
MT-CO1P00395 TSSK5P-201ENST00000423978 907 ntBASIC16.47■□□□□ 0.23
MT-CO1P00395 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-CO1P00395 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-CO1P00395 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-CO1P00395 INGX-202ENST00000489074 768 ntBASIC16.47■□□□□ 0.23
MT-CO1P00395 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 AL079307.3-201ENST00000556114 283 ntBASIC16.47■□□□□ 0.23
MT-CO1P00395 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.47■□□□□ 0.23
MT-CO1P00395 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.47■□□□□ 0.23
MT-CO1P00395 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-CO1P00395 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-CO1P00395 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MT-CO1P00395 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 AL136982.4-201ENST00000437689 1740 ntBASIC16.47■□□□□ 0.23
MT-CO1P00395 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 CETN4P-206ENST00000642099 2168 ntBASIC16.47■□□□□ 0.23
MT-CO1P00395 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MT-CO1P00395 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MT-CO1P00395 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MT-CO1P00395 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-CO1P00395 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-CO1P00395 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.46■□□□□ 0.23
MT-CO1P00395 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MT-CO1P00395 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-CO1P00395 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MT-CO1P00395 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
MT-CO1P00395 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 FAM8A3P-201ENST00000427218 844 ntBASIC16.46■□□□□ 0.23
MT-CO1P00395 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.46■□□□□ 0.23
MT-CO1P00395 AC241585.1-201ENST00000433527 519 ntBASIC16.46■□□□□ 0.23
MT-CO1P00395 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
MT-CO1P00395 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.46■□□□□ 0.23
MT-CO1P00395 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 TEX28P1-201ENST00000613479 1221 ntBASIC16.46■□□□□ 0.23
MT-CO1P00395 TEX28P2-201ENST00000617764 1221 ntBASIC16.46■□□□□ 0.23
MT-CO1P00395 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
MT-CO1P00395 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-CO1P00395 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-CO1P00395 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-CO1P00395 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
MT-CO1P00395 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.46■□□□□ 0.22
MT-CO1P00395 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.46■□□□□ 0.22
MT-CO1P00395 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.46■□□□□ 0.22
MT-CO1P00395 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
MT-CO1P00395 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-CO1P00395 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.45■□□□□ 0.22
MT-CO1P00395 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-CO1P00395 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 AC004890.2-204ENST00000481968 304 ntBASIC16.45■□□□□ 0.22
MT-CO1P00395 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms