Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RDH16O75452 SPDYE17-201ENST00000412399 783 ntBASIC15.18■□□□□ 0.02
RDH16O75452 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.18■□□□□ 0.02
RDH16O75452 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 AL590560.3-201ENST00000623350 461 ntBASIC15.18■□□□□ 0.02
RDH16O75452 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.18■□□□□ 0.02
RDH16O75452 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RDH16O75452 KRT8P12-202ENST00000472924 1397 ntBASIC15.18■□□□□ 0.02
RDH16O75452 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RDH16O75452 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RDH16O75452 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.18■□□□□ 0.02
RDH16O75452 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RDH16O75452 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.18■□□□□ 0.02
RDH16O75452 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
RDH16O75452 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RDH16O75452 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RDH16O75452 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RDH16O75452 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RDH16O75452 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.17■□□□□ 0.02
RDH16O75452 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.17■□□□□ 0.02
RDH16O75452 AL512638.1-201ENST00000457493 794 ntBASIC15.17■□□□□ 0.02
RDH16O75452 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.17■□□□□ 0.02
RDH16O75452 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.17■□□□□ 0.02
RDH16O75452 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.17■□□□□ 0.02
RDH16O75452 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.17■□□□□ 0.02
RDH16O75452 AC011467.4-201ENST00000594891 528 ntBASIC15.17■□□□□ 0.02
RDH16O75452 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
RDH16O75452 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.17■□□□□ 0.02
RDH16O75452 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 KRT8P37-201ENST00000451609 1420 ntBASIC15.17■□□□□ 0.02
RDH16O75452 AC024909.3-201ENST00000611513 2257 ntBASIC15.17■□□□□ 0.02
RDH16O75452 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RDH16O75452 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.16■□□□□ 0.02
RDH16O75452 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.16■□□□□ 0.02
RDH16O75452 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.16■□□□□ 0.02
RDH16O75452 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.16■□□□□ 0.02
RDH16O75452 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.16■□□□□ 0.02
RDH16O75452 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.16■□□□□ 0.02
RDH16O75452 SERBP1P3-201ENST00000459980 809 ntBASIC15.16■□□□□ 0.02
RDH16O75452 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.16■□□□□ 0.02
RDH16O75452 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.16■□□□□ 0.02
RDH16O75452 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.16■□□□□ 0.02
RDH16O75452 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.16■□□□□ 0.02
RDH16O75452 AC069224.1-201ENST00000566372 1715 ntBASIC15.16■□□□□ 0.02
RDH16O75452 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RDH16O75452 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RDH16O75452 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms