Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.07
SEC22BO75396 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.52■□□□□ 0.07
SEC22BO75396 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 AC011477.6-201ENST00000604980 1927 ntBASIC15.52■□□□□ 0.07
SEC22BO75396 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.52■□□□□ 0.07
SEC22BO75396 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SEC22BO75396 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.52■□□□□ 0.07
SEC22BO75396 CICP13-201ENST00000422015 2789 ntBASIC15.52■□□□□ 0.07
SEC22BO75396 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
SEC22BO75396 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC22BO75396 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC22BO75396 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 IL9RP2-201ENST00000423948 1312 ntBASIC15.51■□□□□ 0.07
SEC22BO75396 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC22BO75396 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC22BO75396 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.51■□□□□ 0.07
SEC22BO75396 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC22BO75396 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC22BO75396 PDPK2P-202ENST00000562415 1191 ntBASIC15.51■□□□□ 0.07
SEC22BO75396 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.51■□□□□ 0.07
SEC22BO75396 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.51■□□□□ 0.07
SEC22BO75396 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SEC22BO75396 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 AC013268.4-201ENST00000637413 2228 ntBASIC15.51■□□□□ 0.07
SEC22BO75396 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC22BO75396 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC22BO75396 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC22BO75396 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SEC22BO75396 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.5■□□□□ 0.07
SEC22BO75396 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.5■□□□□ 0.07
SEC22BO75396 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.5■□□□□ 0.07
SEC22BO75396 AC112191.1-201ENST00000523689 701 ntBASIC15.5■□□□□ 0.07
SEC22BO75396 AP002472.1-201ENST00000577490 586 ntBASIC15.5■□□□□ 0.07
SEC22BO75396 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.5■□□□□ 0.07
SEC22BO75396 AL513190.1-201ENST00000621254 727 ntBASIC15.5■□□□□ 0.07
SEC22BO75396 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC22BO75396 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC22BO75396 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
SEC22BO75396 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms