Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 AL512638.1-201ENST00000457493 794 ntBASIC16.21■□□□□ 0.19
PRAMEF11O60813 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 RNA5SP421-201ENST00000516864 134 ntBASIC16.21■□□□□ 0.19
PRAMEF11O60813 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 AC009407.1-201ENST00000568958 598 ntBASIC16.21■□□□□ 0.19
PRAMEF11O60813 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF11O60813 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF11O60813 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF11O60813 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF11O60813 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC008894.3-201ENST00000624324 3103 ntBASIC16.2■□□□□ 0.18
PRAMEF11O60813 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 TARDBPP1-201ENST00000442013 1203 ntBASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 SDHAP3-202ENST00000515467 728 ntBASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 AC022144.1-201ENST00000602255 1580 ntBASIC16.2■□□□□ 0.18
PRAMEF11O60813 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF11O60813 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms