Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HCN1O60741 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HCN1O60741 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
HCN1O60741 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCN1O60741 PCGF3-213ENST00000620529 1899 ntBASIC15.08■□□□□ 0.01
HCN1O60741 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.08■□□□□ 0
HCN1O60741 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 AC006449.6-201ENST00000612330 2296 ntBASIC15.08■□□□□ 0
HCN1O60741 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.08■□□□□ 0
HCN1O60741 KRT18P32-201ENST00000424695 1287 ntBASIC15.08■□□□□ 0
HCN1O60741 SPCS2P4-201ENST00000436160 681 ntBASIC15.08■□□□□ 0
HCN1O60741 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.08■□□□□ 0
HCN1O60741 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.08■□□□□ 0
HCN1O60741 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.08■□□□□ 0
HCN1O60741 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.08■□□□□ 0
HCN1O60741 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.08■□□□□ 0
HCN1O60741 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HCN1O60741 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
HCN1O60741 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.08■□□□□ 0
HCN1O60741 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.08■□□□□ 0
HCN1O60741 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
HCN1O60741 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 GPAA1P2-202ENST00000606848 1787 ntBASIC15.08■□□□□ 0
HCN1O60741 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.08■□□□□ 0
HCN1O60741 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.08■□□□□ 0
HCN1O60741 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.08■□□□□ 0
HCN1O60741 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HCN1O60741 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCN1O60741 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.07■□□□□ 0
HCN1O60741 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.07■□□□□ 0
HCN1O60741 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
HCN1O60741 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.07■□□□□ 0
HCN1O60741 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HCN1O60741 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HCN1O60741 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HCN1O60741 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.07■□□□□ 0
HCN1O60741 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.07■□□□□ 0
HCN1O60741 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HCN1O60741 AC069335.1-201ENST00000489972 472 ntBASIC15.07■□□□□ 0
HCN1O60741 AC067863.1-201ENST00000494933 530 ntBASIC15.07■□□□□ 0
HCN1O60741 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 LINC01225-203ENST00000563550 1244 ntBASIC15.07■□□□□ 0
HCN1O60741 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HCN1O60741 AC015911.4-201ENST00000588022 1070 ntBASIC15.07■□□□□ 0
HCN1O60741 AC008267.7-201ENST00000624570 1194 ntBASIC15.07■□□□□ 0
HCN1O60741 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 AC084121.4-201ENST00000641598 221 ntBASIC15.07■□□□□ 0
HCN1O60741 AF228730.8-201ENST00000642140 221 ntBASIC15.07■□□□□ 0
HCN1O60741 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HCN1O60741 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.07■□□□□ 0
HCN1O60741 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HCN1O60741 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCN1O60741 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms