Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SPDYE18-201ENST00000510091 1050 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 KRT17P8-201ENST00000540749 863 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 AC061975.2-201ENST00000581722 295 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 AL589702.1-201ENST00000641229 1509 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC007950.2-201ENST00000615045 2347 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 MIR1909-201ENST00000411312 80 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC022494.1-201ENST00000466044 728 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 RAB43P1-201ENST00000561790 589 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC020765.3-201ENST00000613051 740 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 MIR6069-201ENST00000620069 79 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 LINC00554-201ENST00000564841 3011 ntBASIC15.91■□□□□ 0.14
PCDHGA12O60330 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA12O60330 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA12O60330 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.9■□□□□ 0.14
PCDHGA12O60330 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.9■□□□□ 0.14
PCDHGA12O60330 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms