Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.64■□□□□ 0.25
MSI1O43347 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 AC069224.1-201ENST00000566372 1715 ntBASIC16.63■□□□□ 0.25
MSI1O43347 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MSI1O43347 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.63■□□□□ 0.25
MSI1O43347 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.63■□□□□ 0.25
MSI1O43347 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.63■□□□□ 0.25
MSI1O43347 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.63■□□□□ 0.25
MSI1O43347 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.63■□□□□ 0.25
MSI1O43347 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MSI1O43347 MIR6069-201ENST00000620069 79 ntBASIC16.63■□□□□ 0.25
MSI1O43347 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.63■□□□□ 0.25
MSI1O43347 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.63■□□□□ 0.25
MSI1O43347 AL109936.8-201ENST00000641772 604 ntBASIC16.63■□□□□ 0.25
MSI1O43347 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 REXO1L1P-202ENST00000608646 1974 ntBASIC16.63■□□□□ 0.25
MSI1O43347 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MSI1O43347 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.63■□□□□ 0.25
MSI1O43347 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MSI1O43347 LINC02447-202ENST00000501888 2146 ntBASIC16.63■□□□□ 0.25
MSI1O43347 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSI1O43347 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.62■□□□□ 0.25
MSI1O43347 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 CDC14C-201ENST00000428251 1719 ntBASIC16.62■□□□□ 0.25
MSI1O43347 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
MSI1O43347 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
MSI1O43347 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
MSI1O43347 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MSI1O43347 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
MSI1O43347 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 AC002472.2-201ENST00000442739 958 ntBASIC16.62■□□□□ 0.25
MSI1O43347 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.62■□□□□ 0.25
MSI1O43347 SERBP1P5-201ENST00000510079 1181 ntBASIC16.62■□□□□ 0.25
MSI1O43347 SPDYE18-201ENST00000510091 1050 ntBASIC16.62■□□□□ 0.25
MSI1O43347 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.62■□□□□ 0.25
MSI1O43347 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MSI1O43347 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.62■□□□□ 0.25
MSI1O43347 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
MSI1O43347 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MSI1O43347 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSI1O43347 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.62■□□□□ 0.25
MSI1O43347 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
MSI1O43347 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.61■□□□□ 0.25
MSI1O43347 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MSI1O43347 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.61■□□□□ 0.25
MSI1O43347 PCDHA1-201ENST00000378133 2726 ntBASIC16.61■□□□□ 0.25
MSI1O43347 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.61■□□□□ 0.25
MSI1O43347 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms