Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 MIR4313-201ENST00000580760 101 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 AC020658.6-201ENST00000623564 1870 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 PPT1-215ENST00000641471 2368 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
FOXN3O00409 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXN3O00409 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC104640.1-201ENST00000562617 2109 ntBASIC17.16■□□□□ 0.34
FOXN3O00409 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.16■□□□□ 0.34
FOXN3O00409 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXN3O00409 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 AC144831.1-201ENST00000573312 2656 ntBASIC17.16■□□□□ 0.34
FOXN3O00409 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXN3O00409 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXN3O00409 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FOXN3O00409 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXN3O00409 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXN3O00409 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 KRT18P32-201ENST00000424695 1287 ntBASIC17.15■□□□□ 0.34
FOXN3O00409 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXN3O00409 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
FOXN3O00409 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
FOXN3O00409 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 AC022532.1-201ENST00000624563 1728 ntBASIC17.15■□□□□ 0.34
FOXN3O00409 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXN3O00409 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXN3O00409 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXN3O00409 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms