Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL390755.1-201ENST00000623716 2027 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AP005117.1-202ENST00000581724 1908 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PPT1-213ENST00000641319 2388 ntBASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AL596087.1-201ENST00000400979 1969 ntBASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ABHD17AP6-201ENST00000458502 1044 ntBASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 AC010980.2-201ENST00000587099 1412 ntBASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms