Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 FAM8A4P-201ENST00000435433 1213 ntBASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 AC021723.1-201ENST00000486306 515 ntBASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 AC006453.1-201ENST00000636037 1257 ntBASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 KRT8P29-201ENST00000420409 1371 ntBASIC18.3■□□□□ 0.52
TMEM88BA6NKF7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 KLF2P2-201ENST00000416807 1039 ntBASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AC092171.5-201ENST00000608012 942 ntBASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 AC025271.4-201ENST00000621477 1726 ntBASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM88BA6NKF7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms