Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 KRT18P43-201ENST00000469825 1281 ntBASIC13.98□□□□□ -0.17
MBD3L3A6NE82 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AC008735.3-201ENST00000596646 500 ntBASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 INTS4P2-202ENST00000614726 2019 ntBASIC13.98□□□□□ -0.17
MBD3L3A6NE82 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AL596087.1-201ENST00000400979 1969 ntBASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 AC134915.1-201ENST00000426461 574 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 ENPP7P5-201ENST00000541031 1031 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 AL359711.2-201ENST00000563105 872 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 RPSAP52-203ENST00000622976 1023 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CU634019.7-201ENST00000624153 1185 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FP236241.2-201ENST00000624906 1185 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.97□□□□□ -0.17
MBD3L3A6NE82 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
MBD3L3A6NE82 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms