Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 CHCHD2P8-201ENST00000429873 447 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AL671277.2-201ENST00000458060 996 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 Z69720.1-201ENST00000601483 472 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AC114341.1-201ENST00000618070 349 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 AC005912.2-201ENST00000619492 2400 ntBASIC15.24■□□□□ 0.03
AP4S1Q9Y587 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4S1Q9Y587 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 LINC01023-201ENST00000606054 436 ntBASIC15.23■□□□□ 0.03
AP4S1Q9Y587 AL139424.1-201ENST00000607572 797 ntBASIC15.23■□□□□ 0.03
AP4S1Q9Y587 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4S1Q9Y587 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NSUN5P1-202ENST00000421140 1535 ntBASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NSUN5P2-203ENST00000457352 1529 ntBASIC15.22■□□□□ 0.03
AP4S1Q9Y587 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms