Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA1Q9UND3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA1Q9UND3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA1Q9UND3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA1Q9UND3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA1Q9UND3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 PIN1P1-201ENST00000412108 996 ntBASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 CRB3P1-201ENST00000449338 276 ntBASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 AC105021.1-202ENST00000570572 669 ntBASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 RN7SL828P-201ENST00000607615 303 ntBASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA1Q9UND3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
NPIPA1Q9UND3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 POU5F1P6-201ENST00000466990 990 ntBASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA1Q9UND3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms