Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SPDYE13P-201ENST00000445314 798 ntBASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.65□□□□□ -0.22
UBQLN2Q9UHD9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
UBQLN2Q9UHD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 LINC00895-201ENST00000629028 1637 ntBASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBQLN2Q9UHD9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms