Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 PCDHB19P-201ENST00000570871 2371 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LINC02199-201ENST00000506655 2702 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC069224.1-201ENST00000566372 1715 ntBASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 RN7SL752P-201ENST00000463779 287 ntBASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 AC011477.6-201ENST00000604980 1927 ntBASIC20.25■□□□□ 0.83
CHPF2Q9P2E5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 KRT17P7-201ENST00000451704 1104 ntBASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 SLED1-202ENST00000512051 380 ntBASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 WFDC1-204ENST00000613603 549 ntBASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
CHPF2Q9P2E5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 RN7SL399P-201ENST00000471648 279 ntBASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 AC124067.4-201ENST00000519691 2379 ntBASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPF2Q9P2E5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHPF2Q9P2E5 AL118508.1-201ENST00000613502 2345 ntBASIC20.22■□□□□ 0.83
CHPF2Q9P2E5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPF2Q9P2E5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPF2Q9P2E5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.22■□□□□ 0.83
CHPF2Q9P2E5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms