Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 AP005117.1-201ENST00000584346 1413 ntBASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 BX005266.1-201ENST00000473402 457 ntBASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 AL139288.1-201ENST00000623748 933 ntBASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 AP000550.4-202ENST00000639755 178 ntBASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C12orf4Q9NQ89 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 REXO1L2P-201ENST00000425429 2069 ntBASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C12orf4Q9NQ89 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 COL6A4P2-202ENST00000504443 2753 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AL139424.1-201ENST00000607572 797 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AP001269.4-201ENST00000609611 512 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 NPAP1P7-201ENST00000613027 823 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AL596087.1-201ENST00000400979 1969 ntBASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms