Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC012044.1-201ENST00000603431 297 ntBASIC14.59□□□□□ -0.07
CHD8Q9HCK8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 MIR4321-201ENST00000592276 80 ntBASIC14.59□□□□□ -0.07
CHD8Q9HCK8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.58□□□□□ -0.07
CHD8Q9HCK8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CHD8Q9HCK8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.58□□□□□ -0.07
CHD8Q9HCK8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CHD8Q9HCK8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 AC136604.1-201ENST00000418535 575 ntBASIC14.58□□□□□ -0.08
CHD8Q9HCK8 AP003171.2-201ENST00000528208 925 ntBASIC14.58□□□□□ -0.08
CHD8Q9HCK8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 ISCA2P1-201ENST00000425548 448 ntBASIC14.58□□□□□ -0.08
CHD8Q9HCK8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 AC020922.3-201ENST00000595064 547 ntBASIC14.58□□□□□ -0.08
CHD8Q9HCK8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHD8Q9HCK8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AC021016.3-201ENST00000608367 477 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 TBC1D3J-201ENST00000620719 1426 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms