Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS11Q9H270 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS11Q9H270 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS11Q9H270 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS11Q9H270 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS11Q9H270 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS11Q9H270 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS11Q9H270 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS11Q9H270 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS11Q9H270 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS11Q9H270 AC108751.1-201ENST00000490852 363 ntBASIC16.21■□□□□ 0.19
VPS11Q9H270 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
VPS11Q9H270 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
VPS11Q9H270 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS11Q9H270 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.21■□□□□ 0.19
VPS11Q9H270 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS11Q9H270 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS11Q9H270 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS11Q9H270 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS11Q9H270 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.21■□□□□ 0.18
VPS11Q9H270 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.21■□□□□ 0.18
VPS11Q9H270 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS11Q9H270 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
VPS11Q9H270 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS11Q9H270 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.2■□□□□ 0.18
VPS11Q9H270 PRSS29P-201ENST00000440800 595 ntBASIC16.2■□□□□ 0.18
VPS11Q9H270 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS11Q9H270 KRT18P56-201ENST00000507275 550 ntBASIC16.2■□□□□ 0.18
VPS11Q9H270 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.2■□□□□ 0.18
VPS11Q9H270 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 MIR3909-201ENST00000579518 119 ntBASIC16.2■□□□□ 0.18
VPS11Q9H270 FAM215A-202ENST00000632077 792 ntBASIC16.2■□□□□ 0.18
VPS11Q9H270 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS11Q9H270 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS11Q9H270 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS11Q9H270 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms