Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AC007191.1-201ENST00000623179 2995 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 LINC00552-201ENST00000625151 2579 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 MIR4492-201ENST00000581627 80 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 NTF6B-201ENST00000591913 560 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AL353135.1-201ENST00000606729 504 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AL590326.2-201ENST00000625139 305 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AL034417.3-201ENST00000641100 1043 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AC091951.1-201ENST00000512854 2465 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 LINC01144-201ENST00000626198 1710 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 AC015656.1-201ENST00000624209 3578 ntBASIC12.22□□□□□ -0.45
SSBP4Q9BWG4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AC087481.3-201ENST00000602886 1894 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AC233702.3-201ENST00000578656 1387 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 RCN1P2-201ENST00000398357 915 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 KRT18P57-201ENST00000443599 1254 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AC104076.2-201ENST00000448912 469 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AC022616.7-201ENST00000525383 220 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 LINC01238-205ENST00000567549 1107 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 BNIP3P18-201ENST00000593976 575 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 Z69720.1-201ENST00000601483 472 ntBASIC12.21□□□□□ -0.45
SSBP4Q9BWG4 AL121672.3-201ENST00000608644 468 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms