Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 RNU1-129P-201ENST00000384064 167 ntBASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AL031432.2-201ENST00000566714 459 ntBASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AL928711.1-201ENST00000570165 459 ntBASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 U1.21-201ENST00000580816 167 ntBASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHRDL1Q9BU40 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 FDX1P1-201ENST00000449115 551 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC096734.2-201ENST00000562054 433 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC034105.1-201ENST00000563488 319 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC145285.3-201ENST00000564603 959 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AL645728.2-201ENST00000641974 660 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 IL9RP2-201ENST00000423948 1312 ntBASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CHRDL1Q9BU40 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms