Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
NDNQ99608 AC138035.3-201ENST00000622706 2791 ntBASIC16.18■□□□□ 0.18
NDNQ99608 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.18■□□□□ 0.18
NDNQ99608 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
NDNQ99608 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NDNQ99608 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 AC026396.1-201ENST00000419388 421 ntBASIC16.18■□□□□ 0.18
NDNQ99608 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.18■□□□□ 0.18
NDNQ99608 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.18■□□□□ 0.18
NDNQ99608 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.18■□□□□ 0.18
NDNQ99608 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
NDNQ99608 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.18■□□□□ 0.18
NDNQ99608 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.18■□□□□ 0.18
NDNQ99608 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.18■□□□□ 0.18
NDNQ99608 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.18■□□□□ 0.18
NDNQ99608 AC027601.4-201ENST00000611259 610 ntBASIC16.18■□□□□ 0.18
NDNQ99608 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NDNQ99608 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 SNX18-202ENST00000343017 3140 ntBASIC16.18■□□□□ 0.18
NDNQ99608 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NDNQ99608 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.18■□□□□ 0.18
NDNQ99608 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.18■□□□□ 0.18
NDNQ99608 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.17■□□□□ 0.18
NDNQ99608 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.17■□□□□ 0.18
NDNQ99608 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
NDNQ99608 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NDNQ99608 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.17■□□□□ 0.18
NDNQ99608 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.17■□□□□ 0.18
NDNQ99608 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 PRYP6-201ENST00000514804 343 ntBASIC16.17■□□□□ 0.18
NDNQ99608 AC099522.2-201ENST00000607001 744 ntBASIC16.17■□□□□ 0.18
NDNQ99608 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NDNQ99608 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDNQ99608 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
NDNQ99608 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 PKD1P5-201ENST00000532415 10291 ntBASIC16.16■□□□□ 0.18
NDNQ99608 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NDNQ99608 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 MIR940-201ENST00000401276 94 ntBASIC16.16■□□□□ 0.18
NDNQ99608 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
NDNQ99608 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.16■□□□□ 0.18
NDNQ99608 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms