Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AL122018.1-201ENST00000446607 2310 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AL359258.3-201ENST00000622910 2331 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AL137784.3-201ENST00000623858 2288 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AP002414.1-201ENST00000391405 1147 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AL671277.2-201ENST00000458060 996 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 DUX4L17-201ENST00000557360 1267 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AC013467.2-201ENST00000605472 835 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.22□□□□□ -0.45
AP1S3Q96PC3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP1S3Q96PC3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 KRT18P57-201ENST00000443599 1254 ntBASIC12.21□□□□□ -0.45
AP1S3Q96PC3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 KRT8P26-201ENST00000534154 1276 ntBASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC011498.5-201ENST00000592027 486 ntBASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 AC079781.5-202ENST00000641784 3743 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms